Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermovibrio ammonificans HB-1 (GCF_000185805.1)

Found 24 curated entries in PaperBLAST's database that match '1.2.1.11' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thermovibrio ammonificans HB-1, or try another query

THEAM_RS01810 Theam_0349 WP_013537108.1: aspartate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

asd / Q04797: aspartate semialdehyde dehydrogenase subunit (EC 1.2.1.11) from Bacillus subtilis

 58% id,
99% cov

DHAS2_VIBCH / P23247: Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 from Vibrio cholerae

 55% id,
98% cov

AT1G14810 / Q8VYI4: aspartate semialdehyde dehydrogenase (EC 1.2.1.11) from Arabidopsis thaliana

 56% id,
90% cov

More...

argC THEAM_RS01940 Theam_0377 WP_013537136.1: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:		 PaperBLAST

DHAS_METJA / Q57658: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Methanocaldococcus jannaschii
asd / Q57658: aspartate-semialdehyde dehydrogenase monomer (EC 1.2.1.11) from Methanocaldococcus jannaschii

 24% id,
52% cov

Q5KPK7: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Cryptococcus neoformans

 24% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory