Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermovibrio ammonificans HB-1 (GCF_000185805.1)

Found 25 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Thermovibrio ammonificans HB-1, or try another query

hemL THEAM_RS08090 Theam_1600 WP_013538342.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

33% id,
91% cov

THEAM_RS03435 Theam_0678 WP_013537432.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

29% id,
97% cov

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

24% id,
97% cov

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

25% id,
91% cov

More...

THEAM_RS00985 Theam_0191 WP_013536950.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

24% id,
94% cov

THEAM_RS02845 Theam_0558 WP_013537316.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

ATTY_HUMAN / P17735: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Homo sapiens

25% id,
86% cov

ATTY_RAT / P04694: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Rattus norvegicus

25% id,
84% cov

ATTY_MOUSE / Q8QZR1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Mus musculus
Q8QZR1: tyrosine transaminase (EC 2.6.1.5) from Mus musculus

24% id,
84% cov

THEAM_RS02695 Theam_0526 WP_013537284.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

31% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory