Curated BLAST for Genomes

 

Curated BLAST

Searching in Mesorhizobium ciceri biovar biserrulae WSM1271 (GCF_000185905.1)

Found 57 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 47 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Mesorhizobium ciceri biovar biserrulae WSM1271, or try another query

MESCI_RS24640 Mesci_4918 WP_013532676.1: asparaginase
is similar to:
PaperBLAST

PGA1_c36210: L-asparaginase (EC 3.5.1.1) from Phaeobacter inhibens

41% id,
99% cov

A0A0C5GVW3: asparaginase (EC 3.5.1.1) from Paenibacillus barengoltzii

33% id,
95% cov

MESCI_RS30405 Mesci_6097 WP_013525045.1: isoaspartyl peptidase/L-asparaginase family protein
is similar to:
PaperBLAST

ASPGP_PYRAB / Q9V262: Plant-type L-asparaginase; L-asparaginase I; L-asparagine amidohydrolase; EC 3.5.1.1 from Pyrococcus abyssi

35% id,
100% cov

DVU2242: asparaginase (EC 3.5.1.1) from Desulfovibrio vulgaris

36% id,
96% cov

ASPGP_THEKO / Q5JHT1: Plant-type L-asparaginase; L-asparagine amidohydrolase; EC 3.5.1.1 from Thermococcus kodakarensis
Q5JHT1: asparaginase (EC 3.5.1.1) from Thermococcus kodakarensis

34% id,
100% cov

More...

MESCI_RS31325 Mesci_6293 WP_013525230.1: ankyrin repeat domain-containing protein
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

27% id,
28% cov

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

29% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory