Curated BLAST for Genomes

 

Curated BLAST

Searching in Mesorhizobium ciceri biovar biserrulae WSM1271 (GCF_000185905.1)

Found 17 curated entries in PaperBLAST's database that match '5.2.1.2' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Mesorhizobium ciceri biovar biserrulae WSM1271, or try another query

maiA MESCI_RS17400 Mesci_3453 WP_013531255.1: maleylacetoacetate isomerase
is similar to:
PaperBLAST

Ac3H11_2306: Maleylacetoacetate isomerase (EC 5.2.1.2) from Acidovorax sp.

52% id,
100% cov

SO1671: Maleylacetoacetate isomerase (EC 5.2.1.2) from Shewanella oneidensis

50% id,
100% cov

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

48% id,
99% cov

More...

MESCI_RS21845 Mesci_4357 WP_013532130.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

30% id,
96% cov

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

30% id,
96% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

29% id,
96% cov

More...

MESCI_RS06875 Mesci_1378 WP_013529231.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

MAIA_ASPFU / Q4WHT7: Maleylacetoacetate isomerase maiA; EC 5.2.1.2 from Aspergillus fumigatus

27% id,
92% cov

MESCI_RS23225 Mesci_4634 WP_063167709.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

27% id,
88% cov

MAAI_HUMAN / O43708: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Homo sapiens
GSTZ1 / O43708: maleylacetoacetate isomerase/glutathione transferase ζ monomer (EC 2.5.1.18; EC 5.2.1.2) from Homo sapiens
O43708: glutathione transferase (EC 2.5.1.18); maleylacetoacetate isomerase (EC 5.2.1.2) from Homo sapiens

27% id,
48% cov

MESCI_RS21945 Mesci_4377 WP_013532149.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

26% id,
91% cov

MESCI_RS10350 Mesci_2059 WP_013529899.1: glutathione S-transferase
is similar to:
PaperBLAST

MAAI_HUMAN / O43708: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Homo sapiens
GSTZ1 / O43708: maleylacetoacetate isomerase/glutathione transferase ζ monomer (EC 2.5.1.18; EC 5.2.1.2) from Homo sapiens
O43708: glutathione transferase (EC 2.5.1.18); maleylacetoacetate isomerase (EC 5.2.1.2) from Homo sapiens

26% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1435965-1436654 (frame +3) on NC_014923.1 Mesorhizobium ciceri biovar biserrulae WSM1271, complete sequence
is similar to:
PaperBLAST

MAIA_ASPFU / Q4WHT7: Maleylacetoacetate isomerase maiA; EC 5.2.1.2 from Aspergillus fumigatus
Also see hits to annotated proteins above

28% id,
95% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory