Curated BLAST for Genomes

 

Curated BLAST

Searching in Nitratifractor salsuginis DSM 16511 (GCF_000186245.1)

Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Nitratifractor salsuginis DSM 16511, or try another query

thrB NITSA_RS09565 Nitsa_1899 WP_013554828.1: homoserine kinase
is similar to:
PaperBLAST

P07128: homoserine kinase (EC 2.7.1.39) from Corynebacterium glutamicum

32% id,
85% cov

KHSE_ARATH / Q8L7R2: Homoserine kinase; Protein DOWNY MILDEW RESISTANT 1; EC 2.7.1.39 from Arabidopsis thaliana
hsk / Q8L7R2: homoserine kinase (EC 2.7.1.39) from Arabidopsis thaliana
Q8L7R2: homoserine kinase (EC 2.7.1.39) from Arabidopsis thaliana

32% id,
85% cov

CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp.

28% id,
89% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1869182-1870186 (frame -1) on NC_014935.1 Nitratifractor salsuginis DSM 16511, complete sequence
is similar to:
PaperBLAST

KHSE_ARATH / Q8L7R2: Homoserine kinase; Protein DOWNY MILDEW RESISTANT 1; EC 2.7.1.39 from Arabidopsis thaliana
hsk / Q8L7R2: homoserine kinase (EC 2.7.1.39) from Arabidopsis thaliana
Q8L7R2: homoserine kinase (EC 2.7.1.39) from Arabidopsis thaliana
Also see hits to annotated proteins above

31% id,
93% cov

CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp.
Also see hits to annotated proteins above

27% id,
90% cov

Q4Q6Y2: homoserine kinase (EC 2.7.1.39) from Leishmania major
Also see hits to annotated proteins above

27% id,
89% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory