Curated BLAST for Genomes

 

Curated BLAST

Searching in Nitratifractor salsuginis DSM 16511 (GCF_000186245.1)

Found 31 curated entries in PaperBLAST's database that match '4.1.3.30' as complete word(s).

These curated entries have 26 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Nitratifractor salsuginis DSM 16511, or try another query

aepX NITSA_RS07160 Nitsa_1412 WP_013554350.1: phosphoenolpyruvate mutase
is similar to:
PaperBLAST

RR42_RS11260: Methylisocitrate lyase (EC 4.1.3.30) from Cupriavidus basilensis

28% id,
93% cov

PRPB1_CORGL / Q8NSH8: Probable 2-methylisocitrate lyase 1; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Corynebacterium glutamicum

31% id,
83% cov

P54528: Methylisocitrate lyase (EC 4.1.3.30) from Bacillus subtilis

26% id,
88% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory