Curated BLAST for Genomes

 

Curated BLAST

Searching in Nitratifractor salsuginis DSM 16511 (GCF_000186245.1)

Found 40 curated entries in PaperBLAST's database that match '4.3.3.7' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Nitratifractor salsuginis DSM 16511, or try another query

dapA NITSA_RS04680 Nitsa_0919 WP_013553873.1: 4-hydroxy-tetrahydrodipicolinate synthase
is similar to:
PaperBLAST

DAPA_PSEAE / Q9I4W3: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Pseudomonas aeruginosa
Q9I4W3: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Pseudomonas aeruginosa

50% id,
93% cov

DAPA_METJA / Q57695: 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7 from Methanocaldococcus jannaschii

46% id,
99% cov

O67216: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Aquifex aeolicus

45% id,
99% cov

More...

dapB NITSA_RS03385 Nitsa_0666 WP_013553628.1: 4-hydroxy-tetrahydrodipicolinate reductase
is similar to:
PaperBLAST

Q3MFY8: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) from Trichormus variabilis

27% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory