Curated BLAST for Genomes

 

Curated BLAST

Searching in Nitratifractor salsuginis DSM 16511 (GCF_000186245.1)

Found 43 curated entries in PaperBLAST's database that match '5.3.1.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Nitratifractor salsuginis DSM 16511, or try another query

NITSA_RS00315 Nitsa_0059 WP_013553029.1: KpsF/GutQ family sugar-phosphate isomerase
is similar to:
PaperBLAST

Q3IG38: L-arabinose isomerase (EC 5.3.1.4) from Pseudoalteromonas haloplanktis

41% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory