Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanobacterium lacus AL-21 (GCF_000191585.1)

Found 17 curated entries in PaperBLAST's database that match '1.1.2.8' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanobacterium lacus AL-21, or try another query

METBO_RS00300 Metbo_0062 WP_013643666.1: PQQ-binding-like beta-propeller repeat protein
is similar to:
PaperBLAST

B1N7J5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida

25% id,
29% cov

QEDH_PSEAE / Q9Z4J7: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); EC 1.1.2.8 from Pseudomonas aeruginosa
exaA / Q9Z4J7: alcohol dehydrogenase (cytochrome c550) monomer (EC 1.1.2.8) from Pseudomonas aeruginosa
Q9Z4J7: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas aeruginosa

27% id,
22% cov

PS417_17460: Quinoprotein ethanol dehydrogenase QedA (EC 1.1.2.8) from Pseudomonas simiae

31% id,
13% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory