Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanobacterium lacus AL-21 (GCF_000191585.1)

Found 10 curated entries in PaperBLAST's database that match '2.3.1.117' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanobacterium lacus AL-21, or try another query

METBO_RS11340 Metbo_2294 WP_013645859.1: gamma carbonic anhydrase family protein
is similar to:
PaperBLAST

DAPD_ECOLI / P0A9D8: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Succinyl-CoA: tetrahydrodipicolinate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Escherichia coli
Ssa / b0166: tetrahydrodipicolinate succinylase (EC 2.3.1.117) from Escherichia coli
dapD / P0A9D8: tetrahydrodipicolinate succinylase (EC 2.3.1.117) from Escherichia coli

26% id,
39% cov

Q8X8Y7: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Escherichia coli

26% id,
39% cov

DAPD_UNKP / P56220: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Unknown prokaryotic

26% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory