Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanobacterium lacus AL-21 (GCF_000191585.1)

Found 1 curated entries in PaperBLAST's database that match '2.3.1.89' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Methanobacterium lacus AL-21, or try another query

METBO_RS14085 Metbo_2132 WP_013645702.1: CatB-related O-acetyltransferase
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

27% id,
73% cov

METBO_RS03705 Metbo_0728 WP_013644330.1: acyltransferase
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

29% id,
66% cov

METBO_RS11340 Metbo_2294 WP_013645859.1: gamma carbonic anhydrase family protein
is similar to:
PaperBLAST

DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis

29% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory