Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanobacterium lacus AL-21 (GCF_000191585.1)

Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Methanobacterium lacus AL-21, or try another query

METBO_RS06350 Metbo_1268 WP_013644861.1: PLP-dependent aspartate aminotransferase family protein
is similar to:
PaperBLAST

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

50% id,
99% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

49% id,
96% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

48% id,
96% cov

More...

METBO_RS06070 Metbo_1212 WP_013644806.1: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein
is similar to:
PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

32% id,
100% cov

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

31% id,
97% cov

Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.

31% id,
94% cov

More...

hisC METBO_RS11345 Metbo_2295 WP_013645860.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum

25% id,
47% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

32% id,
25% cov

METBO_RS00865 Metbo_0172 WP_013643775.1: cysteine desulfurase
is similar to:
PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

28% id,
36% cov

METBO_RS14025 WP_265101216.1: PLP-dependent aspartate aminotransferase family protein
is similar to:
PaperBLAST

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

56% id,
13% cov

H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum

55% id,
10% cov

L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris

42% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory