Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanobacterium lacus AL-21 (GCF_000191585.1)

Found 8 curated entries in PaperBLAST's database that match '2.5.1.65' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methanobacterium lacus AL-21, or try another query

cysK METBO_RS05910 Metbo_1179 WP_013644774.1: cysteine synthase A
is similar to:
PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

42% id,
97% cov

P9WP53: [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase (EC 2.5.1.113); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

38% id,
92% cov

cysK / Q5JIZ7: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.65) from Thermococcus kodakarensis

34% id,
99% cov

More...

thrC METBO_RS03125 Metbo_0613 WP_013644215.1: threonine synthase
is similar to:
PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

25% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory