Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanobacterium lacus AL-21 (GCF_000191585.1)

Found 23 curated entries in PaperBLAST's database that match '2.6.1.9' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Methanobacterium lacus AL-21, or try another query

hisC METBO_RS11345 Metbo_2295 WP_013645860.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

33% id,
100% cov

Pf6N2E2_3251: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas fluorescens

33% id,
98% cov

HIS8_CALS4 / Q8R5Q4: Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus

33% id,
96% cov

More...

METBO_RS03010 Metbo_0590 WP_013644192.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

21% id,
82% cov

METBO_RS04185 Metbo_0824 WP_013644426.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

23% id,
71% cov

HIS8_CALS4 / Q8R5Q4: Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus

27% id,
39% cov

HIS8_ECOLI / P06986: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 from Escherichia coli
HisC / b2021: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli
hisC / P06986: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli

31% id,
24% cov

METBO_RS06350 Metbo_1268 WP_013644861.1: PLP-dependent aspartate aminotransferase family protein
is similar to:
PaperBLAST

BT0202: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Bacteroides thetaiotaomicron

26% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory