Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanobacterium lacus AL-21 (GCF_000191585.1)

Found 14 curated entries in PaperBLAST's database that match '6.3.1.11' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methanobacterium lacus AL-21, or try another query

METBO_RS09175 Metbo_1856 WP_013645428.1: glutamine synthetase
is similar to:
PaperBLAST

GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei

36% id,
93% cov

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

28% id,
86% cov

Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

28% id,
81% cov

More...

glnA METBO_RS12305 Metbo_2484 WP_013646048.1: type I glutamate--ammonia ligase
is similar to:
PaperBLAST

GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei

32% id,
93% cov

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans

30% id,
95% cov

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

29% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory