Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanobacterium lacus AL-21 (GCF_000191585.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Methanobacterium lacus AL-21, or try another query

METBO_RS10115 Metbo_2047 WP_013645617.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

50% id,
95% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

48% id,
96% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

46% id,
99% cov

METBO_RS11635 Metbo_2355 WP_013645919.1: GMP synthase subunit A
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

27% id,
99% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

27% id,
96% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

25% id,
97% cov

carA METBO_RS11020 Metbo_2227 WP_013645792.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

29% id,
78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory