Curated BLAST for Genomes

 

Curated BLAST

Searching in Ruegeria conchae TW15 (GCF_000192475.1)

Found 8 curated entries in PaperBLAST's database that match '1.1.1.401' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 25 relevant proteins in Ruegeria conchae TW15, or try another query

G7G_RS0113540 WP_010441975.1: alcohol dehydrogenase catalytic domain-containing protein
is similar to:
PaperBLAST

E1QSX6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Vulcanisaeta distributa

36% id,
99% cov

D4GPB2: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Haloferax volcanii

29% id,
100% cov

G7G_RS0103500 WP_010438425.1: SDR family oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

36% id,
96% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

32% id,
97% cov

G7G_RS0110540 WP_037321328.1: SDR family oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

35% id,
98% cov

fabG G7G_RS0114145 WP_010442087.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

36% id,
95% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

34% id,
98% cov

G7G_RS0100475 WP_010437259.1: SDR family oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

35% id,
94% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

31% id,
95% cov

phbB G7G_RS0122065 WP_010443651.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

34% id,
95% cov

G7G_RS0120430 WP_010443330.1: L-iditol 2-dehydrogenase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

32% id,
96% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

28% id,
96% cov

G7G_RS0100585 WP_010437290.1: 3-oxoacyl-ACP reductase family protein
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

32% id,
96% cov

G7G_RS0108180 WP_010440323.1: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

32% id,
96% cov

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

30% id,
97% cov

G7G_RS0113535 WP_010441974.1: SDR family oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

32% id,
96% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

28% id,
97% cov

G7G_RS0108780 WP_010440528.1: SDR family oxidoreductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

30% id,
99% cov

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

29% id,
97% cov

G7G_RS0107310 WP_010440131.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

31% id,
95% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

28% id,
97% cov

tdh G7G_RS0116430 WP_010442537.1: L-threonine 3-dehydrogenase
is similar to:
PaperBLAST

D4GPB2: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Haloferax volcanii

29% id,
99% cov

G7G_RS0108810 WP_010440544.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

35% id,
82% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

28% id,
95% cov

G7G_RS0114760 WP_010442207.1: SDR family oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

39% id,
72% cov

G7G_RS0108580 WP_010440420.1: SDR family oxidoreductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

29% id,
94% cov

G7G_RS0115915 WP_010442436.1: SDR family oxidoreductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

27% id,
98% cov

G7G_RS0108530 WP_010440396.1: SDR family oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

28% id,
96% cov

G7G_RS0114880 WP_010442231.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

27% id,
96% cov

G7G_RS0108775 WP_010440523.1: SDR family oxidoreductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

25% id,
97% cov

G7G_RS0111310 WP_010441525.1: SDR family oxidoreductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

24% id,
97% cov

G7G_RS0100445 WP_010437253.1: SDR family oxidoreductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

24% id,
96% cov

G7G_RS0102500 WP_010437975.1: Zn-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

D4GPB2: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Haloferax volcanii

23% id,
94% cov

G7G_RS0122515 WP_010443829.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

35% id,
46% cov

G7G_RS0103375 WP_010438374.1: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

E1QSX6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Vulcanisaeta distributa

38% id,
30% cov

KDRDH_SULTA / P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; EC 1.1.1.401 from Sulfobacillus thermosulfidooxidans
P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sulfobacillus thermosulfidooxidans

32% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 23 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory