Curated BLAST for Genomes

 

Curated BLAST

Searching in Ruegeria conchae TW15 (GCF_000192475.1)

Found 25 curated entries in PaperBLAST's database that match '2.7.2.8' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Ruegeria conchae TW15, or try another query

argB G7G_RS0100260 WP_029621561.1: acetylglutamate kinase
is similar to:
PaperBLAST

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa

51% id,
97% cov

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

46% id,
96% cov

ARGB_THEMA / Q9X2A4: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Thermotoga maritima
Q9X2A4: acetylglutamate kinase (EC 2.7.2.8) from Thermotoga maritima

45% id,
98% cov

More...

G7G_RS0112120 WP_010441694.1: aspartate kinase
is similar to:
PaperBLAST

Q59281: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium glutamicum

26% id,
61% cov

Q6R6P5: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium crenatum

26% id,
56% cov

proB G7G_RS0107250 WP_010440100.1: glutamate 5-kinase
is similar to:
PaperBLAST

ARGB_MYCTU / P9WQ01: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Mycobacterium tuberculosis

27% id,
46% cov

Q59281: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium glutamicum

28% id,
29% cov

Q6R6P5: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium crenatum

28% id,
27% cov

argC G7G_RS0106780 WP_010439881.1: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae
Q01217: acetylglutamate kinase (EC 2.7.2.8) from Saccharomyces cerevisiae

28% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

134612-135046 (frame +2) on NZ_AEYW01000006.1 Ruegeria conchae strain TW15 contig00006, whole genome shotgun sequence
is similar to:
PaperBLAST

A0A1D6E3W6: acetylglutamate kinase (EC 2.7.2.8) from Zea mays
Also see hits to annotated proteins above

39% id,
16% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory