Curated BLAST for Genomes

 

Curated BLAST

Searching in Archaeoglobus veneficus SNP6 (GCF_000194625.1)

Found 5 curated entries in PaperBLAST's database that match '2.1.3.11' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Archaeoglobus veneficus SNP6, or try another query

argF ARCVE_RS06905 Arcve_1384 WP_013684049.1: ornithine carbamoyltransferase
is similar to:
PaperBLAST

argF' / Q8A1E9: N-succinylornithine carbamoyltransferase (EC 2.1.3.11) from Bacteroides thetaiotaomicron
BT3717: N-succinylornithine carbamoyltransferase (EC 2.1.3.11) from Bacteroides thetaiotaomicron
Q8A1E9: N-succinylornithine carbamoyltransferase (EC 2.1.3.11) from Bacteroides fragilis

29% id,
99% cov

SOTC_BACF6 / E1WKT5: N-succinylornithine carbamoyltransferase; N-succinyl-L-ornithine transcarbamylase; SOTCase; EC 2.1.3.11 from Bacteroides fragilis

28% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory