Curated BLAST for Genomes

 

Curated BLAST

Searching in Archaeoglobus veneficus SNP6 (GCF_000194625.1)

Found 331 curated entries in PaperBLAST's database that match '3.2.1.23' as complete word(s).

These curated entries have 255 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Archaeoglobus veneficus SNP6, or try another query

ARCVE_RS07680 Arcve_1547 WP_013684209.1: beta-galactosidase
is similar to:
PaperBLAST

ABA39423.1: β-galactosidase (GalD) (EC 3.2.1.23)

28% id,
25% cov

CAC14567.1: β-galactosidase (INF1) (EC 3.2.1.23)

25% id,
15% cov

ABP87597.1: β-galactosidase P2 (BbgII) (EC 3.2.1.23)

25% id,
15% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory