Curated BLAST for Genomes

 

Curated BLAST

Searching in Archaeoglobus veneficus SNP6 (GCF_000194625.1)

Found 6 curated entries in PaperBLAST's database that match 'acetohydroxy-acid synthase%small' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Archaeoglobus veneficus SNP6, or try another query

ilvN ARCVE_RS07080 Arcve_1421 WP_013684085.1: acetolactate synthase small subunit
is similar to:
PaperBLAST

ilvN / O08354: acetohydroxy-acid synthase small subunit (EC 2.2.1.6) from Methanococcus aeolicus

57% id,
98% cov

ILVH_MYCTU / P9WKJ3: Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis

53% id,
96% cov

ILVH2_ARATH / Q9FFF4: Acetolactate synthase small subunit 2, chloroplastic; ALS-interacting protein 3; Acetohydroxy-acid synthase small subunit 2; Protein valine-tolerant 1 from Arabidopsis thaliana

51% id,
32% cov

More...

serA ARCVE_RS07580 Arcve_1526 WP_013684189.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

ILVH_MYCTU / P9WKJ3: Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis

31% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory