Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfobacca acetoxidans DSM 11109 (GCF_000195295.1)

Found 64 curated entries in PaperBLAST's database that match '2.3.1.9' as complete word(s).

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfobacca acetoxidans DSM 11109, or try another query

fabF DESAC_RS02740 Desac_0553 WP_013705552.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

ER10A_ASPFC / B0XMC1: Acetyl-CoA acetyltransferase erg10A, mitochondrial; Acetoacetyl-CoA thiolase erg10A; Ergosterol biosynthesis protein 10A; EC 2.3.1.9 from Aspergillus fumigatus
ER10A_ASPFU / Q4WLA8: Acetyl-CoA acetyltransferase erg10A, mitochondrial; Acetoacetyl-CoA thiolase erg10A; Ergosterol biosynthesis protein 10A; EC 2.3.1.9 from Aspergillus fumigatus
B0XMC1: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Aspergillus fumigatus

28% id,
29% cov

B1YB71: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pyrobaculum neutrophilum

48% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2180098-2181441 (frame +1) on NC_015388.1 Desulfobacca acetoxidans DSM 11109, complete sequence
is similar to:
PaperBLAST

B1YB71: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pyrobaculum neutrophilum
Also see hits to annotated proteins above

40% id,
13% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory