Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides fluxus YIT 12057 (GCF_000195635.1)

Found 25 curated entries in PaperBLAST's database that match '2.7.7.64' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Bacteroides fluxus YIT 12057, or try another query

HMPREF9446_RS10495 HMPREF9446_02365 WP_009125621.1: nucleotidyltransferase family protein
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

28% id,
95% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

25% id,
88% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

35% id,
32% cov

HMPREF9446_RS16020 HMPREF9446_03581 WP_009126788.1: CTP--phosphocholine cytidylyltransferase
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

27% id,
98% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

30% id,
39% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

29% id,
34% cov

More...

rfbA HMPREF9446_RS05535 HMPREF9446_01232 WP_009124463.1: glucose-1-phosphate thymidylyltransferase RfbA
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

26% id,
85% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

26% id,
79% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

40% id,
18% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory