Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichormus variabilis ATCC 29413 (GCF_000204075.1)

Found 22 curated entries in PaperBLAST's database that match '1.14.16.1' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Trichormus variabilis ATCC 29413, or try another query

pheA AVA_RS06500 Ava_1284 WP_041456041.1: prephenate dehydratase
is similar to:
PaperBLAST

PH4H_DICDI / Q54XS1: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; Tryptophan 5-hydroxylase; TRH; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Dictyostelium discoideum

37% id,
16% cov

Q8TEY0: phenylalanine 4-monooxygenase (EC 1.14.16.1) from Homo sapiens

38% id,
14% cov

PH4H_HUMAN / P00439: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; EC 1.14.16.1 from Homo sapiens
PAH / P00439: phenylalanine hydroxylase subunit (EC 1.14.16.1) from Homo sapiens
P00439: phenylalanine 4-monooxygenase (EC 1.14.16.1) from Homo sapiens

38% id,
14% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory