Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichormus variabilis ATCC 29413 (GCF_000204075.1)

Found 105 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 88 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Trichormus variabilis ATCC 29413, or try another query

AVA_RS17895 Ava_3534 WP_011320250.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

50% id,
100% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

42% id,
97% cov

AL9A1_RAT / Q9JLJ3: 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABADH; Aldehyde dehydrogenase family 9 member A1; Formaldehyde dehydrogenase; Gamma-aminobutyraldehyde dehydrogenase; EC 1.2.1.47; EC 1.2.1.3; EC 1.2.1.46; EC 1.2.1.19 from Rattus norvegicus

33% id,
92% cov

More...

AVA_RS18330 Ava_3615 WP_011320326.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

AL3A2_RAT / P30839: Aldehyde dehydrogenase family 3 member A2; Aldehyde dehydrogenase 4; Fatty aldehyde dehydrogenase; Microsomal aldehyde dehydrogenase; msALDH; EC 1.2.1.3; EC 1.2.1.94 from Rattus norvegicus

50% id,
94% cov

AL3A2_HUMAN / P51648: Aldehyde dehydrogenase family 3 member A2; Aldehyde dehydrogenase 10; Fatty aldehyde dehydrogenase; Microsomal aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.94 from Homo sapiens
ALDH3A2 / P51648: fatty aldehyde dehydrogenase (EC 1.2.1.3; EC 1.2.1.94; EC 1.2.1.39) from Homo sapiens

50% id,
94% cov

AL3A2_MOUSE / P47740: Aldehyde dehydrogenase family 3 member A2; Aldehyde dehydrogenase 3; Fatty aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.94 from Mus musculus
P47740: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

49% id,
95% cov

More...

AVA_RS07875 Ava_1554 WP_011318370.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Q72KD3: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Thermus thermophilus

44% id,
92% cov

A0A1U7EWW7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Natronomonas pharaonis

40% id,
97% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

39% id,
95% cov

More...

pruA AVA_RS14900 Ava_2942 WP_011319687.1: L-glutamate gamma-semialdehyde dehydrogenase
is similar to:
PaperBLAST

AL1A1_MACFA / Q8HYE4: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Macaca fascicularis

34% id,
99% cov

ALDH3_YEAST / P54114: Aldehyde dehydrogenase [NAD(P)+] 2; EC 1.2.1.3 from Saccharomyces cerevisiae
ALD3 / P54114: aldehyde dehydrogenase (EC 1.2.1.8; EC 1.2.1.3) from Saccharomyces cerevisiae

36% id,
93% cov

ALDH2_YEAST / P47771: Aldehyde dehydrogenase [NAD(P)+] 1; EC 1.2.1.3 from Saccharomyces cerevisiae
ALD2 / P47771: aldehyde dehydrogenase (EC 1.2.1.8; EC 1.2.1.3) from Saccharomyces cerevisiae

35% id,
93% cov

More...

AVA_RS28750 Ava_C0165 WP_011316739.1: zinc-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

33% id,
99% cov

AVA_RS22855 Ava_4500 WP_011321169.1: zinc-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

33% id,
99% cov

AVA_RS22845 Ava_4498 WP_011321167.1: zinc-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

32% id,
99% cov

AVA_RS11425 Ava_2258 WP_011319043.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

31% id,
94% cov

AL1A1_RABIT / Q8MI17: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Oryctolagus cuniculus

30% id,
94% cov

ALDH2_YEAST / P47771: Aldehyde dehydrogenase [NAD(P)+] 1; EC 1.2.1.3 from Saccharomyces cerevisiae
ALD2 / P47771: aldehyde dehydrogenase (EC 1.2.1.8; EC 1.2.1.3) from Saccharomyces cerevisiae

30% id,
92% cov

More...

AVA_RS00775 Ava_0154 WP_041455898.1: zinc-dependent dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

29% id,
99% cov

AVA_RS22765 Ava_4482 WP_011321152.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

28% id,
79% cov

AVA_RS08185 Ava_1615 WP_011318428.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

28% id,
78% cov

AVA_RS12600 Ava_2489 WP_011319262.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

24% id,
37% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

24% id,
37% cov

AVA_RS16885 Ava_3336 WP_011320060.1: alcohol dehydrogenase catalytic domain-containing protein
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

37% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory