Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Trichormus variabilis ATCC 29413 (GCF_000204075.1)

Found 21 curated entries in PaperBLAST's database that match '1.2.1.79' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Trichormus variabilis ATCC 29413, or try another query

AVA_RS17895 Ava_3534 WP_011320250.1: NAD-dependent succinate-semialdehyde dehydrogenase is similar to:	PaperBLAST
Q8YR92: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Nostoc sp.	99% id, 100% cov
SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp. B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.	66% id, 100% cov
Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.	65% id, 100% cov
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis	59% id, 100% cov
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP⁺) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans	50% id, 100% cov
A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum	48% id, 98% cov
A0A0J9X1M8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes	40% id, 98% cov
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis	36% id, 98% cov
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli GabD / b2661: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79) from Escherichia coli gabD / P25526: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli	36% id, 94% cov
A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii	33% id, 94% cov
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus	32% id, 96% cov
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator	32% id, 93% cov
A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens	33% id, 84% cov
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis	29% id, 86% cov
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AVA_RS07875 Ava_1554 WP_011318370.1: aldehyde dehydrogenase family protein is similar to:	PaperBLAST
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis	38% id, 99% cov
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli GabD / b2661: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79) from Escherichia coli gabD / P25526: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli	38% id, 97% cov
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator	35% id, 97% cov
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP⁺) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans	35% id, 97% cov
A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii	36% id, 94% cov
A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum	32% id, 99% cov
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis	32% id, 98% cov
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus	31% id, 98% cov
Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.	31% id, 98% cov
Q8YR92: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Nostoc sp.	31% id, 99% cov
SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp. B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.	30% id, 98% cov
A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens	31% id, 93% cov
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis	33% id, 86% cov
A0A0J9X1M8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes	29% id, 95% cov
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pruA AVA_RS14900 Ava_2942 WP_011319687.1: L-glutamate gamma-semialdehyde dehydrogenase is similar to:	PaperBLAST
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli GabD / b2661: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79) from Escherichia coli gabD / P25526: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli	37% id, 95% cov
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis	32% id, 98% cov
SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp. B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.	33% id, 96% cov
Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.	31% id, 99% cov
A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum	31% id, 99% cov
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator	31% id, 99% cov
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus	31% id, 99% cov
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP⁺) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans	30% id, 99% cov
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis	30% id, 99% cov
A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii	30% id, 96% cov
Q8YR92: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Nostoc sp.	30% id, 96% cov
A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens	30% id, 90% cov
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis	31% id, 86% cov
More...

AVA_RS11425 Ava_2258 WP_011319043.1: aldehyde dehydrogenase family protein is similar to:	PaperBLAST
A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii	34% id, 86% cov
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis	30% id, 100% cov
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis	35% id, 84% cov
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP⁺) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans	31% id, 94% cov
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli GabD / b2661: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79) from Escherichia coli gabD / P25526: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli	31% id, 91% cov
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator	31% id, 91% cov
A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum	29% id, 93% cov
SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp. B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.	27% id, 100% cov
Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.	27% id, 100% cov
A0A0J9X1M8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes	27% id, 94% cov
Q8YR92: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Nostoc sp.	26% id, 91% cov
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus	33% id, 69% cov
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis	32% id, 71% cov
A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens	28% id, 81% cov
More...

AVA_RS18330 Ava_3615 WP_011320326.1: aldehyde dehydrogenase family protein is similar to:	PaperBLAST
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis	28% id, 95% cov
A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum	26% id, 92% cov
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis	26% id, 86% cov
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator	29% id, 76% cov
Q8YR92: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Nostoc sp.	25% id, 89% cov
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP⁺) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans	23% id, 97% cov
Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.	25% id, 88% cov
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus	26% id, 83% cov
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis	27% id, 76% cov
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli GabD / b2661: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79) from Escherichia coli gabD / P25526: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli	30% id, 70% cov
A0A0J9X1M8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes	24% id, 87% cov
A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens	28% id, 71% cov
SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp. B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.	26% id, 74% cov
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The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory