Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichormus variabilis ATCC 29413 (GCF_000204075.1)

Found 35 curated entries in PaperBLAST's database that match '2.3.1.1' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Trichormus variabilis ATCC 29413, or try another query

argJ AVA_RS15765 Ava_3118 WP_011319855.1: bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
is similar to:
PaperBLAST

ARGJ_CITLA / Q3C251: Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; EC 2.3.1.35; EC 2.3.1.1 from Citrullus lanatus

58% id,
90% cov

ARGJ_ARATH / Q9ZUR7: Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; EC 2.3.1.35; EC 2.3.1.1 from Arabidopsis thaliana

57% id,
88% cov

ARGJ_GEOSE / Q07908: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Geobacillus stearothermophilus

46% id,
96% cov

More...

argJ AVA_RS03395 Ava_0671 WP_011317542.1: bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
is similar to:
PaperBLAST

ARGJ_GEOSE / Q07908: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Geobacillus stearothermophilus

44% id,
95% cov

ARGJ_THENN / Q9Z4S1: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Thermotoga neapolitana

41% id,
99% cov

ARGJ_HALH5 / Q9K8V3: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Halalkalibacterium halodurans

38% id,
97% cov

More...

AVA_RS16840 Ava_3327 WP_011320051.1: GNAT family N-acetyltransferase
is similar to:
PaperBLAST

MnaT / b1448: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli
mnaT / P76112: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli

35% id,
94% cov

argB AVA_RS02805 Ava_0554 WP_011317428.1: acetylglutamate kinase
is similar to:
PaperBLAST

Q87EL2: amino-acid N-acetyltransferase (EC 2.3.1.1) from Xylella fastidiosa

34% id,
63% cov

ABZR86_RS08705: N-acetylglutamate synthase; N-acetylglutamate kinase (EC 2.3.1.1; EC 2.7.2.8) from Dyella japonica

30% id,
63% cov

P22567: amino-acid N-acetyltransferase (EC 2.3.1.1) from Pseudomonas aeruginosa

29% id,
65% cov

More...

AVA_RS07535 Ava_1487 WP_011318308.1: GNAT family N-acetyltransferase
is similar to:
PaperBLAST

MnaT / b1448: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli
mnaT / P76112: L-amino acid N-acyltransferase (EC 2.3.1.1) from Escherichia coli

23% id,
72% cov

ARGA_ECOLI / P0A6C5: Amino-acid acetyltransferase; N-acetylglutamate synthase; AGS; NAGS; EC 2.3.1.1 from Escherichia coli
ArgA / b2818: N-acetylglutamate synthase (EC 2.3.1.1) from Escherichia coli
argA / P0A6C5: N-acetylglutamate synthase (EC 2.3.1.1) from Escherichia coli

23% id,
17% cov

rimI AVA_RS04605 Ava_0911 WP_011317765.1: ribosomal protein S18-alanine N-acetyltransferase
is similar to:
PaperBLAST

Q9I3W7: amino-acid N-acetyltransferase (EC 2.3.1.1) from Pseudomonas aeruginosa

37% id,
38% cov

AVA_RS11320 Ava_2240 WP_224311858.1: N-acetyltransferase
is similar to:
PaperBLAST

cg3035 / Q8NM40: L-glutamate N-acetyltransferase (EC 2.3.1.1) from Corynebacterium glutamicum
Q8NM40: amino-acid N-acetyltransferase (EC 2.3.1.1) from Corynebacterium glutamicum

35% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3873137-3874420 (frame +2) on NC_007413.1 Trichormus variabilis ATCC 29413, complete sequence
is similar to:
PaperBLAST

ARGJ_CITLA / Q3C251: Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; EC 2.3.1.35; EC 2.3.1.1 from Citrullus lanatus
Also see hits to annotated proteins above

57% id,
91% cov

ARGJ_ARATH / Q9ZUR7: Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; EC 2.3.1.35; EC 2.3.1.1 from Arabidopsis thaliana
Also see hits to annotated proteins above

56% id,
90% cov

ARGJ_YEAST / Q04728: Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Extracellular mutant protein 40; EC 2.3.1.35; EC 2.3.1.1 from Saccharomyces cerevisiae
Also see hits to annotated proteins above

36% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory