Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichormus variabilis ATCC 29413 (GCF_000204075.1)

Found 18 curated entries in PaperBLAST's database that match '2.3.1.35' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Trichormus variabilis ATCC 29413, or try another query

argJ AVA_RS15765 Ava_3118 WP_011319855.1: bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
is similar to:
PaperBLAST

ARGJ_CITLA / Q3C251: Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; EC 2.3.1.35; EC 2.3.1.1 from Citrullus lanatus

58% id,
90% cov

ARGJ_ARATH / Q9ZUR7: Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; EC 2.3.1.35; EC 2.3.1.1 from Arabidopsis thaliana

57% id,
88% cov

DVU0823: Glutamate N-acetyltransferase (EC 2.3.1.35) from Desulfovibrio vulgaris

45% id,
99% cov

More...

argJ AVA_RS03395 Ava_0671 WP_011317542.1: bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
is similar to:
PaperBLAST

GNAT2_STRCL / P0DJQ5: Glutamate N-acetyltransferase 2; Ornithine acetyltransferase 2; Ornithine transacetylase 2; OATase 2; EC 2.3.1.35 from Streptomyces clavuligerus
P0DJQ5: glutamate N-acetyltransferase (EC 2.3.1.35) from Streptomyces clavuligerus

51% id,
100% cov

ARGJ_GEOSE / Q07908: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Geobacillus stearothermophilus

44% id,
95% cov

ARGJ_THENN / Q9Z4S1: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Thermotoga neapolitana

41% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3873137-3874420 (frame +2) on NC_007413.1 Trichormus variabilis ATCC 29413, complete sequence
is similar to:
PaperBLAST

ARGJ_CITLA / Q3C251: Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; EC 2.3.1.35; EC 2.3.1.1 from Citrullus lanatus
Also see hits to annotated proteins above

57% id,
91% cov

ARGJ_ARATH / Q9ZUR7: Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; EC 2.3.1.35; EC 2.3.1.1 from Arabidopsis thaliana
Also see hits to annotated proteins above

56% id,
90% cov

ARGJ_YEAST / Q04728: Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Extracellular mutant protein 40; EC 2.3.1.35; EC 2.3.1.1 from Saccharomyces cerevisiae
Also see hits to annotated proteins above

36% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory