Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichormus variabilis ATCC 29413 (GCF_000204075.1)

Found 18 curated entries in PaperBLAST's database that match '4.2.1.96' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Trichormus variabilis ATCC 29413, or try another query

AVA_RS12710 Ava_2511 WP_011319284.1: 4a-hydroxytetrahydrobiopterin dehydratase
is similar to:
PaperBLAST

PHS_SCHPO / O42658: Pterin-4-alpha-carbinolamine dehydratase; PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Overlapping meiotic transcript 2; Pterin carbinolamine dehydratase; PCD; EC 4.2.1.96 from Schizosaccharomyces pombe
omt2 / RF|NP_594610.1: 4-alpha-hydroxytetrahydrobiopterin dehydratase (predicted); EC 4.2.1.96 from Schizosaccharomyces pombe

39% id,
93% cov

Q2Q449: 4a-hydroxytetrahydrobiopterin dehydratase (EC 4.2.1.96) from Toxoplasma gondii

39% id,
86% cov

PHS_HUMAN / P61457: Pterin-4-alpha-carbinolamine dehydratase; PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Dimerization cofactor of hepatocyte nuclear factor 1-alpha; DCoH; Dimerization cofactor of HNF1; Phenylalanine hydroxylase-stimulating protein; Pterin carbinolamine dehydratase; PCD; EC 4.2.1.96 from Homo sapiens
PHS_RAT / P61459: Pterin-4-alpha-carbinolamine dehydratase; PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Dimerization cofactor of hepatocyte nuclear factor 1-alpha; DCoH; Dimerization cofactor of HNF1; Phenylalanine hydroxylase-stimulating protein; Pterin carbinolamine dehydratase; PCD; EC 4.2.1.96 from Rattus norvegicus
PCBD1 / P61457: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) from Homo sapiens

40% id,
73% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory