Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Trichormus variabilis ATCC 29413 (GCF_000204075.1)

Found 22 curated entries in PaperBLAST's database that match 'Glycine cleavage system H' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Trichormus variabilis ATCC 29413, or try another query

gcvH AVA_RS13975 Ava_2761 WP_011319515.1: glycine cleavage system protein GcvH is similar to:	PaperBLAST
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp.	52% id, 97% cov
GCSH_STAAM / P64213: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Staphylococcus aureus	49% id, 98% cov
GCSH_BACSU / O32174: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Bacillus subtilis	48% id, 93% cov
PfGW456L13_1869: glycine cleavage system H protein (EC 1.4.1.27) from Pseudomonas fluorescens	41% id, 99% cov
GCSH_THET8 / Q5SKW9: Glycine cleavage system H protein from Thermus thermophilus	39% id, 99% cov
GCSH_ECOLI / P0A6T9: Glycine cleavage system H protein from Escherichia coli Gcv / b2904: glycine cleavage system H protein from Escherichia coli gcvH / P0A6T9: glycine cleavage system H protein from Escherichia coli	40% id, 97% cov
GCSH_FLATR / P46485: Glycine cleavage system H protein, mitochondrial; Lipoyl-bearing H protein from Flaveria trinervia	44% id, 79% cov
GCSH_ORYSJ / A3C6G9: Glycine cleavage system H protein, mitochondrial from Oryza sativa	46% id, 74% cov
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii	45% id, 74% cov
GCSH3_ARATH / Q9LQL0: Glycine cleavage system H protein 3, mitochondrial from Arabidopsis thaliana	42% id, 74% cov
GCSH1_ARATH / P25855: Glycine cleavage system H protein 1, mitochondrial from Arabidopsis thaliana GDH1 / P25855: glycine cleavage system H protein 1 (EC 1.4.1.27) from Arabidopsis thaliana	42% id, 75% cov
GCSH_SCHPO / Q9HDV9: Putative glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Schizosaccharomyces pombe	40% id, 72% cov
GCSH_CHICK / P11183: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Gallus gallus	39% id, 73% cov
GCSH_YEAST / P39726: Glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Saccharomyces cerevisiae	35% id, 75% cov
GCVHL_STRPG / P0DN69: Glycine cleavage system H-like protein; GcvH-L from Streptococcus pyogenes	32% id, 82% cov
GCSH_HUMAN / P23434: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Homo sapiens GCSH / P23434: glycine cleavage system H protein, mitochondrial (EC 1.4.1.27) from Homo sapiens	38% id, 69% cov
GCVHL_STAAM / A0A0H3JT43: Glycine cleavage system H-like protein; GcvH-L from Staphylococcus aureus	27% id, 92% cov
GCSH_BOVIN / P20821: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Bos taurus	35% id, 69% cov
More...

accB AVA_RS11705 Ava_2314 WP_011319098.1: acetyl-CoA carboxylase biotin carboxyl carrier protein is similar to:	PaperBLAST
GCSH_STAAM / P64213: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Staphylococcus aureus	35% id, 41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory