Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichormus variabilis ATCC 29413 (GCF_000204075.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Trichormus variabilis ATCC 29413, or try another query

AVA_RS14070 Ava_2780 WP_011319533.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

56% id,
97% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

53% id,
97% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

47% id,
99% cov

pabB AVA_RS17560 Ava_3468 WP_041456890.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

48% id,
94% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

45% id,
99% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

47% id,
93% cov

AVA_RS24820 Ava_4890 WP_011321547.1: anthranilate synthase
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

39% id,
96% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

39% id,
95% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

30% id,
100% cov

carA AVA_RS22395 Ava_4410 WP_011321085.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

34% id,
93% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

36% id,
82% cov

guaA AVA_RS05340 Ava_1054 WP_011317902.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

29% id,
85% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

31% id,
78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory