Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichormus variabilis ATCC 29413 (GCF_000204075.1)

Found 1 curated entries in PaperBLAST's database that match 'small subunit of acetolactate synthase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Trichormus variabilis ATCC 29413, or try another query

ilvN AVA_RS10285 Ava_2035 WP_041456726.1: acetolactate synthase small subunit
is similar to:
PaperBLAST

AN4430: small subunit of acetolactate synthase from Emericella nidulans

45% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2518021-2518611 (frame -1) on NC_007413.1 Trichormus variabilis ATCC 29413, complete sequence
is similar to:
PaperBLAST

AN4430: small subunit of acetolactate synthase from Emericella nidulans
Also see hits to annotated proteins above

43% id,
39% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory