Curated BLAST for Genomes

 

Curated BLAST

Searching in Alicycliphilus denitrificans K601 (GCF_000204645.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.9' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 36 relevant proteins in Alicycliphilus denitrificans K601, or try another query

ALIDE2_RS05720 Alide2_1145 WP_013721610.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

35% id,
99% cov

badH ALIDE2_RS20335 Alide2_4102 WP_013520542.1: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

34% id,
98% cov

ALIDE2_RS07755 Alide2_1547 WP_013519712.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

33% id,
98% cov

ALIDE2_RS00380 Alide2_0074 WP_013517008.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

33% id,
100% cov

ALIDE2_RS00880 Alide2_0176 WP_013517110.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

33% id,
98% cov

ALIDE2_RS05725 Alide2_1146 WP_013721611.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

33% id,
98% cov

ALIDE2_RS21380 Alide2_4312 WP_013723107.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
99% cov

ALIDE2_RS10400 Alide2_2086 WP_013518728.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
98% cov

fabG ALIDE2_RS07570 Alide2_1510 WP_013721723.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
100% cov

ALIDE2_RS05735 Alide2_1148 WP_013721612.1: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
98% cov

ALIDE2_RS21500 Alide2_4337 WP_013723126.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
99% cov

ALIDE2_RS18035 Alide2_3635 WP_013518176.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
98% cov

fabG ALIDE2_RS09190 Alide2_1840 WP_013721926.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
97% cov

ALIDE2_RS20075 Alide2_4050 WP_013520492.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
96% cov

ALIDE2_RS15945 Alide2_3217 WP_013518465.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

31% id,
100% cov

ALIDE2_RS15270 Alide2_3079 WP_013722521.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

30% id,
100% cov

ALIDE2_RS07665 Alide2_1529 WP_013519730.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

DHSO1_YEAST / P35497: Sorbitol dehydrogenase 1; SDH 1; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.9 from Saccharomyces cerevisiae

33% id,
91% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

31% id,
92% cov

A0A1B4XTS0: L-arabinitol 4-dehydrogenase (EC 1.1.1.12); D-xylulose reductase (EC 1.1.1.9) from Meyerozyma caribbica

28% id,
96% cov

More...

ALIDE2_RS22535 Alide2_4543 WP_013520945.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

31% id,
96% cov

DHSO_HUMAN / Q00796: Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens

25% id,
95% cov

DHSO_MOUSE / Q64442: Sorbitol dehydrogenase; SDH; SORD; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Mus musculus

25% id,
95% cov

More...

ALIDE2_RS17940 Alide2_3616 WP_013518195.1: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
98% cov

ALIDE2_RS01550 Alide2_0313 WP_013721235.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
99% cov

ALIDE2_RS08375 Alide2_1674 WP_013721816.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

31% id,
90% cov

ALIDE2_RS12685 Alide2_2545 WP_013519178.1: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

XYL2_YEAST / Q07993: D-xylulose reductase; Xylitol dehydrogenase; XDH; EC 1.1.1.9 from Saccharomyces cerevisiae
Q07993: D-xylulose reductase (EC 1.1.1.9) from Saccharomyces cerevisiae

28% id,
98% cov

G3AIP8: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

29% id,
94% cov

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

30% id,
93% cov

More...

ALIDE2_RS22505 Alide2_4537 WP_013520939.1: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
96% cov

phbB ALIDE2_RS12245 Alide2_2457 WP_013519091.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

28% id,
97% cov

ALIDE2_RS10635 Alide2_2133 WP_013722059.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
82% cov

ALIDE2_RS18640 Alide2_3762 WP_013722891.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus

28% id,
96% cov

eltD / A0QXD8: erythritol/L-threitol dehydrogenase (EC 1.1.1.56; EC 1.1.1.12; EC 1.1.1.9) from Mycolicibacterium smegmatis

27% id,
98% cov

DHSO_MOUSE / Q64442: Sorbitol dehydrogenase; SDH; SORD; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Mus musculus

28% id,
93% cov

More...

phbB ALIDE2_RS08600 Alide2_1719 WP_013721834.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

26% id,
97% cov

ALIDE2_RS11260 Alide2_2261 WP_013518846.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

35% id,
71% cov

ALIDE2_RS18495 Alide2_3733 WP_013722880.1: quinone oxidoreductase
is similar to:
PaperBLAST

Q2K0Q7: D-xylulose reductase (EC 1.1.1.9) from Rhizobium etli

27% id,
95% cov

Dshi_0551: D-xylulose reductase (EC 1.1.1.9) from Dinoroseobacter shibae

26% id,
94% cov

DHSO_RAT / P27867: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Rattus norvegicus

23% id,
93% cov

More...

ALIDE2_RS00665 Alide2_0132 WP_013517066.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
86% cov

ALIDE2_RS04900 Alide2_0980 WP_013520255.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

24% id,
100% cov

ALIDE2_RS19175 Alide2_3867 WP_013722934.1: quinone oxidoreductase
is similar to:
PaperBLAST

Dshi_0551: D-xylulose reductase (EC 1.1.1.9) from Dinoroseobacter shibae

25% id,
95% cov

Q59545: xylitol dehydrogenase (EC 1.1.1.9) from Morganella morganii

27% id,
62% cov

ALIDE2_RS00765 Alide2_0153 WP_013517087.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

28% id,
83% cov

ALIDE2_RS04855 Alide2_0971 WP_013520264.1: 6-hydroxyhexanoate dehydrogenase
is similar to:
PaperBLAST

DHSO1_YEAST / P35497: Sorbitol dehydrogenase 1; SDH 1; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.9 from Saccharomyces cerevisiae

25% id,
91% cov

XYL2_ASPOR / Q86ZV0: D-xylulose reductase A; Xylitol dehydrogenase A; EC 1.1.1.9 from Aspergillus oryzae
GI|83774265: xylitol dehydrogenase; EC 1.1.1.9 from Aspergillus oryzae
xdhA / Q86ZV0: NAD+-dependent xylitol dehydrogenase (EC 1.1.1.9) from Aspergillus oryzae
Q86ZV0: D-xylulose reductase (EC 1.1.1.9) from Aspergillus oryzae

25% id,
91% cov

BPHYT_RS16050: xylitol 2-dehydrogenase (EC 1.1.1.9) from Burkholderia phytofirmans

25% id,
84% cov

More...

ALIDE2_RS23410 Alide2_4722 WP_013521134.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

31% id,
69% cov

ALIDE2_RS03265 Alide2_0656 WP_013721385.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
69% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 32 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4763054-4764526 (frame -2) on NC_015422.1 Alicycliphilus denitrificans K601, complete sequence
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis
Also see hits to annotated proteins above

31% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory