Curated BLAST for Genomes

 

Curated BLAST

Searching in Alicycliphilus denitrificans K601 (GCF_000204645.1)

Found 5 curated entries in PaperBLAST's database that match '1.5.1.50' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Alicycliphilus denitrificans K601, or try another query

ALIDE2_RS02780 Alide2_0559 WP_013517491.1: SDR family oxidoreductase
is similar to:
PaperBLAST

pruA / Q7CZX3: dihydropterin reductase monomer (EC 1.5.1.33; EC 1.5.1.50) from Agrobacterium fabrum

34% id,
90% cov

ALIDE2_RS22505 Alide2_4537 WP_013520939.1: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

pruA / Q7CZX3: dihydropterin reductase monomer (EC 1.5.1.33; EC 1.5.1.50) from Agrobacterium fabrum

31% id,
89% cov

badH ALIDE2_RS20335 Alide2_4102 WP_013520542.1: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase
is similar to:
PaperBLAST

pruA / Q7CZX3: dihydropterin reductase monomer (EC 1.5.1.33; EC 1.5.1.50) from Agrobacterium fabrum

30% id,
89% cov

fabG ALIDE2_RS09190 Alide2_1840 WP_013721926.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

pruA / Q7CZX3: dihydropterin reductase monomer (EC 1.5.1.33; EC 1.5.1.50) from Agrobacterium fabrum

29% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

583164-585254 (frame -1) on NC_015422.1 Alicycliphilus denitrificans K601, complete sequence
is similar to:
PaperBLAST

pruA / Q7CZX3: dihydropterin reductase monomer (EC 1.5.1.33; EC 1.5.1.50) from Agrobacterium fabrum
Also see hits to annotated proteins above

33% id,
95% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory