Curated BLAST for Genomes

 

Curated BLAST

Searching in Alicycliphilus denitrificans K601 (GCF_000204645.1)

Found 23 curated entries in PaperBLAST's database that match '2.6.1.9' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Alicycliphilus denitrificans K601, or try another query

hisC ALIDE2_RS18250 Alide2_3677 WP_013518089.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

63% id,
98% cov

PP_0967: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida

59% id,
99% cov

Pf6N2E2_3251: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas fluorescens

60% id,
98% cov

More...

ALIDE2_RS04145 Alide2_0833 WP_013721469.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

HIS8_CALS4 / Q8R5Q4: Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus

31% id,
98% cov

HIS8_ECOLI / P06986: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 from Escherichia coli
HisC / b2021: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli
hisC / P06986: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli

29% id,
99% cov

DVU1029: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris

32% id,
88% cov

More...

ALIDE2_RS05995 Alide2_1202 WP_013721631.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

Pf6N2E2_3251: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas fluorescens

27% id,
91% cov

DvMF_0908: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris

28% id,
86% cov

ALIDE2_RS11740 Alide2_2356 WP_013518998.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

26% id,
92% cov

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

26% id,
52% cov

ALIDE2_RS05860 Alide2_1174 WP_013520076.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

28% id,
73% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

25% id,
80% cov

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

28% id,
53% cov

dapC ALIDE2_RS12295 Alide2_2467 WP_013722191.1: succinyldiaminopimelate transaminase
is similar to:
PaperBLAST

BT0202: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Bacteroides thetaiotaomicron

26% id,
65% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory