Curated BLAST for Genomes

 

Curated BLAST

Searching in Alicycliphilus denitrificans K601 (GCF_000204645.1)

Found 13 curated entries in PaperBLAST's database that match '3.1.1.15' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Alicycliphilus denitrificans K601, or try another query

ALIDE2_RS01475 Alide2_0298 WP_013721225.1: SMP-30/gluconolactonase/LRE family protein
is similar to:
PaperBLAST

Pf6N2E2_5966: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens

29% id,
94% cov

AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens

28% id,
94% cov

Pf1N1B4_413: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens

30% id,
87% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory