Curated BLAST for Genomes

 

Curated BLAST

Searching in Alicycliphilus denitrificans K601 (GCF_000204645.1)

Found 17 curated entries in PaperBLAST's database that match '5.2.1.2' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Alicycliphilus denitrificans K601, or try another query

maiA ALIDE2_RS12220 Alide2_2452 WP_013722185.1: maleylacetoacetate isomerase
is similar to:
PaperBLAST

Ac3H11_2306: Maleylacetoacetate isomerase (EC 5.2.1.2) from Acidovorax sp.

78% id,
100% cov

SO1671: Maleylacetoacetate isomerase (EC 5.2.1.2) from Shewanella oneidensis

51% id,
99% cov

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

48% id,
98% cov

More...

maiA ALIDE2_RS15510 Alide2_3127 WP_013518622.1: maleylacetoacetate isomerase
is similar to:
PaperBLAST

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

62% id,
98% cov

SO1671: Maleylacetoacetate isomerase (EC 5.2.1.2) from Shewanella oneidensis

57% id,
99% cov

Ac3H11_2306: Maleylacetoacetate isomerase (EC 5.2.1.2) from Acidovorax sp.

54% id,
100% cov

More...

ALIDE2_RS01180 Alide2_0239 WP_013517208.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

29% id,
96% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

28% id,
96% cov

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

26% id,
95% cov

More...

gstA ALIDE2_RS00265 Alide2_0050 WP_013516971.1: glutathione transferase GstA
is similar to:
PaperBLAST

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

29% id,
92% cov

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

26% id,
98% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

29% id,
73% cov

ALIDE2_RS04290 Alide2_0862 WP_013517797.1: glutathione S-transferase N-terminal domain-containing protein
is similar to:
PaperBLAST

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

28% id,
94% cov

SO1671: Maleylacetoacetate isomerase (EC 5.2.1.2) from Shewanella oneidensis

26% id,
96% cov

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

30% id,
81% cov

More...

ALIDE2_RS02855 Alide2_0574 WP_013517505.1: glutathione S-transferase family protein
is similar to:
PaperBLAST

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

29% id,
89% cov

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

27% id,
86% cov

MAAI_HUMAN / O43708: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Homo sapiens
GSTZ1 / O43708: maleylacetoacetate isomerase/glutathione transferase ζ monomer (EC 2.5.1.18; EC 5.2.1.2) from Homo sapiens
O43708: glutathione transferase (EC 2.5.1.18); maleylacetoacetate isomerase (EC 5.2.1.2) from Homo sapiens

31% id,
59% cov

ALIDE2_RS22750 Alide2_4586 WP_013520989.1: glutathione S-transferase N-terminal domain-containing protein
is similar to:
PaperBLAST

Ac3H11_2306: Maleylacetoacetate isomerase (EC 5.2.1.2) from Acidovorax sp.

29% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory