Curated BLAST for Genomes

 

Curated BLAST

Searching in Alicycliphilus denitrificans K601 (GCF_000204645.1)

Found 6 curated entries in PaperBLAST's database that match '6.1.1.24' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Alicycliphilus denitrificans K601, or try another query

ALIDE2_RS11375 Alide2_2284 WP_013518869.1: glutamine--tRNA ligase/YqeY domain fusion protein
is similar to:
PaperBLAST

P00962: glutamine-tRNA ligase (EC 6.1.1.18); glutamate-tRNAGln ligase (EC 6.1.1.24) from Escherichia coli

53% id,
95% cov

gltX / P22250: glutamyl-tRNAGlx synthetase (EC 6.1.1.17; EC 6.1.1.24) from Bacillus subtilis

25% id,
58% cov

CCNA_01982: glutamyl-tRNA(Glx) synthetase (EC 6.1.1.24) from Caulobacter crescentus

27% id,
42% cov

More...

gltX ALIDE2_RS16905 Alide2_3411 WP_013518387.1: glutamate--tRNA ligase
is similar to:
PaperBLAST

CCNA_01982: glutamyl-tRNA(Glx) synthetase (EC 6.1.1.24) from Caulobacter crescentus

40% id,
97% cov

gltX / P22250: glutamyl-tRNAGlx synthetase (EC 6.1.1.17; EC 6.1.1.24) from Bacillus subtilis

39% id,
100% cov

Q9X2I8: glutamate-tRNAGln ligase (EC 6.1.1.24) from Thermotoga maritima

37% id,
93% cov

More...

gluQRS ALIDE2_RS14385 Alide2_2896 WP_013722405.1: tRNA glutamyl-Q(34) synthetase GluQRS
is similar to:
PaperBLAST

CCNA_01982: glutamyl-tRNA(Glx) synthetase (EC 6.1.1.24) from Caulobacter crescentus

37% id,
54% cov

SYEM_HUMAN / Q5JPH6: Nondiscriminating glutamyl-tRNA synthetase EARS2, mitochondrial; Glutamate--tRNA(Gln) ligase EARS2, mitochondrial; Glutamyl-tRNA synthetase; GluRS; Mitochondrial glutamyl-tRNA synthetase; mtGluRS; EC 6.1.1.24; EC 6.1.1.17 from Homo sapiens

35% id,
48% cov

gltX / P22250: glutamyl-tRNAGlx synthetase (EC 6.1.1.17; EC 6.1.1.24) from Bacillus subtilis

32% id,
52% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory