Curated BLAST for Genomes

 

Curated BLAST

Searching in Alicycliphilus denitrificans K601 (GCF_000204645.1)

Found 5 curated entries in PaperBLAST's database that match 'anthranilate synthase alpha subunit' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Alicycliphilus denitrificans K601, or try another query

trpE ALIDE2_RS21780 Alide2_4395 WP_013723154.1: anthranilate synthase component I
is similar to:
PaperBLAST

trpE / AAA25223.1: anthranilate synthase alpha subunit from Lactococcus lactis

38% id,
99% cov

ASA1_ORYSJ / Q94GF1: Anthranilate synthase alpha subunit 1, chloroplastic; OsASA1; EC 4.1.3.27 from Oryza sativa

40% id,
91% cov

ASA2_ORYSJ / Q9XJ29: Anthranilate synthase alpha subunit 2, chloroplastic; OsASA2; EC 4.1.3.27 from Oryza sativa

40% id,
85% cov

More...

pabB ALIDE2_RS05060 Alide2_1013 WP_013721541.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

trpE / AAA25223.1: anthranilate synthase alpha subunit from Lactococcus lactis

30% id,
57% cov

PHNA_PSEAE / P09785: Anthranilate synthase component 1, pyocyanine specific; AS; ASI; Anthranilate synthase alpha subunit, pyocyanine specific; EC 4.1.3.27 from Pseudomonas aeruginosa

31% id,
55% cov

ASA1_ORYSJ / Q94GF1: Anthranilate synthase alpha subunit 1, chloroplastic; OsASA1; EC 4.1.3.27 from Oryza sativa

31% id,
51% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory