Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylomonas methanica MC09 (GCF_000214665.1)

Found 57 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 47 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Methylomonas methanica MC09, or try another query

METME_RS22790 Metme_4552 WP_013821104.1: asparaginase domain-containing protein
is similar to:
PaperBLAST

ASPG_MYCTU / P9WPX5: L-asparaginase; L-ASNase; L-asparagine amidohydrolase; EC 3.5.1.1 from Mycobacterium tuberculosis

25% id,
99% cov

ASPG1_BACSU / P26900: L-asparaginase 1; L-ASNase 1; L-asparagine amidohydrolase 1; EC 3.5.1.1 from Bacillus subtilis

24% id,
98% cov

A0A1I0U0N3: asparaginase (EC 3.5.1.1) from Pseudomonas otitidis

24% id,
92% cov

More...

METME_RS22225 Metme_4433 WP_013820989.1: ankyrin repeat domain-containing protein
is similar to:
PaperBLAST

W0G253: asparaginase (EC 3.5.1.1) from Rhizomucor miehei

25% id,
37% cov

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

28% id,
31% cov

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

33% id,
18% cov

More...

METME_RS00440 Metme_0097 WP_013816820.1: ankyrin repeat domain-containing protein
is similar to:
PaperBLAST

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

26% id,
21% cov

METME_RS01595 Metme_0328 WP_013817048.1: ankyrin repeat domain-containing protein
is similar to:
PaperBLAST

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

33% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory