Curated BLAST
Searching in Methylomonas methanica MC09 (GCF_000214665.1)
Found 31 curated entries in PaperBLAST's database that match '4.1.3.30' as complete word(s).
These curated entries have 26 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Methylomonas methanica MC09, or try another query
METME_RS13795 Metme_2738 WP_013819356.1: oxaloacetate decarboxylase
is similar to: | PaperBLAST |
P54528: Methylisocitrate lyase (EC 4.1.3.30) from Bacillus subtilis | 42% id,
82% cov |
PRPB_ECOLI / P77541: 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Escherichia coli
YahQ / b0331: 2-methylisocitrate lyase (EC 4.1.3.30) from Escherichia coli
prpB / P77541: 2-methylisocitrate lyase (EC 4.1.3.30) from Escherichia coli | 37% id,
89% cov |
PRPB2_CORGL / Q8NSL2: Probable 2-methylisocitrate lyase 2; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Corynebacterium glutamicum | 40% id,
81% cov |
Pf6N2E2_6061: Methylisocitrate lyase (EC 4.1.3.30) from Pseudomonas fluorescens | 41% id,
79% cov |
PRPB_CUPNE / Q937P0: 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Cupriavidus necator | 37% id,
88% cov |
PRPB1_CORGL / Q8NSH8: Probable 2-methylisocitrate lyase 1; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Corynebacterium glutamicum | 39% id,
83% cov |
prpB / Q0KAG5: 2-methylcitrate lyase (EC 4.1.3.30) from Cupriavidus necator | 36% id,
88% cov |
PRPB_SALTY / Q56062: 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Salmonella typhimurium
prpB / Q56062: 2-methylisocitrate lyase subunit (EC 4.1.3.30) from Salmonella typhimurium | 40% id,
79% cov |
PRPB_SHEON / Q8EJW1: 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 from Shewanella oneidensis | 40% id,
79% cov |
RR42_RS11260: Methylisocitrate lyase (EC 4.1.3.30) from Cupriavidus basilensis | 39% id,
77% cov |
Q2L8W6: Methylisocitrate lyase (EC 4.1.3.30) from Toxoplasma gondii | 39% id,
71% cov |
ACEA_YARLI / P41555: Isocitrate lyase; ICL; Isocitrase; Isocitratase; Methylisocitrate lyase; MICA; Threo-D(S)-isocitrate glyoxylate-lyase; EC 4.1.3.1; EC 4.1.3.30 from Yarrowia lipolytica | 37% id,
19% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory