Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylomonas methanica MC09 (GCF_000214665.1)

Found 44 curated entries in PaperBLAST's database that match '6.2.1.1' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Methylomonas methanica MC09, or try another query

acs METME_RS12080 Metme_2399 WP_013819039.1: acetate--CoA ligase
is similar to:		 PaperBLAST

AO356_18695: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

 65% id,
99% cov

AO353_03060: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

 64% id,
99% cov

ACSA_SALTY / Q8ZKF6: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Salmonella typhimurium

 63% id,
99% cov

More...

METME_RS06140 Metme_1220 WP_041365143.1: acyl-CoA ligase (AMP-forming), exosortase A system-associated
is similar to:		 PaperBLAST

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

 27% id,
92% cov

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

 26% id,
87% cov

CCL3_HUMLU / M4IS88: Acetate--CoA ligase CCL3; HlCCL3; 2-methylbutanoate--CoA ligase CCL4; 2-methylpropanoate--CoA ligase CCL4; Butanoate--CoA ligase CCL3; Hexanoate--CoA ligase CCL3; Isovalerate--CoA ligase CCL3; Pentanoate--CoA ligase CCL3; Propionate--CoA ligase CCL3; EC 6.2.1.1; EC 6.2.1.-; EC 6.2.1.17 from Humulus lupulus

 23% id,
91% cov

More...

METME_RS17665 Metme_3523 WP_013820114.1: non-ribosomal peptide synthetase
is similar to:		 PaperBLAST

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

 22% id,
93% cov

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

 23% id,
86% cov

ACSA_BACSU / P39062: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Bacillus subtilis

 23% id,
87% cov

More...

METME_RS01675 Metme_0344 WP_013817064.1: AMP-binding protein
is similar to:		 PaperBLAST

ACSA_BACSU / P39062: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Bacillus subtilis

 23% id,
88% cov

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

 22% id,
85% cov

ACS2L_HUMAN / Q9NUB1: Acetyl-coenzyme A synthetase 2-like, mitochondrial; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Homo sapiens
Q9NUB1: acetate-CoA ligase (EC 6.2.1.1) from Homo sapiens

 22% id,
57% cov

More...

METME_RS17655 Metme_3521 WP_013820112.1: non-ribosomal peptide synthetase
is similar to:		 PaperBLAST

ACS2: acetyl-coenzyme A synthetase 2; EC 6.2.1.1 from Candida albicans

 24% id,
81% cov

ACSA_CUPNH / P31638: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Cupriavidus necator
acsA / P31638: acetyl-CoA synthetase (EC 6.2.1.1; EC 6.2.1.17) from Cupriavidus necator

 26% id,
60% cov

AO356_18695: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

 27% id,
57% cov

More...

METME_RS17660 Metme_3522 WP_013820113.1: non-ribosomal peptide synthetase
is similar to:		 PaperBLAST

AO356_18695: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

 23% id,
82% cov

ACSS3_HUMAN / Q9H6R3: Acyl-CoA synthetase short-chain family member 3, mitochondrial; Acetate--CoA ligase 3; Acyl-CoA synthetase short-chain family member 3; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Homo sapiens

 22% id,
84% cov

AO353_03060: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

 23% id,
79% cov

More...

METME_RS10365 Metme_2061 WP_013818711.1: AMP-binding protein
is similar to:		 PaperBLAST

ACS1_YEAST / Q01574: Acetyl-coenzyme A synthetase 1; Acetate--CoA ligase 1; Acyl-activating enzyme 1; EC 6.2.1.1 from Saccharomyces cerevisiae
ACS1 / Q01574: acetyl CoA synthetase 1 (EC 6.2.1.1) from Saccharomyces cerevisiae

 24% id,
68% cov

METME_RS17645 Metme_3519 WP_013820110.1: non-ribosomal peptide synthetase
is similar to:		 PaperBLAST

ACSA_METTP / A0B8F1: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Methanothrix thermoacetophila
A0B8F1: acetate-CoA ligase (EC 6.2.1.1) from Methanothrix thermoacetophila

 22% id,
55% cov

DIP2A_MOUSE / Q8BWT5: Disco-interacting protein 2 homolog A; DIP2 homolog A; EC 6.2.1.1 from Mus musculus

 26% id,
38% cov

DIP2A_HUMAN / Q14689: Disco-interacting protein 2 homolog A; DIP2 homolog A; EC 6.2.1.1 from Homo sapiens

 26% id,
37% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory