Searching in Thiomicrospira cyclica ALM1 (GCF_000214825.1)
Found 51 curated entries in PaperBLAST's database that match '1.5.5.2' as complete word(s).
These curated entries have 41 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Thiomicrospira cyclica ALM1, or try another query
| THICY_RS01285 Thicy_0252 WP_013834811.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 24% id, 67% cov |
| THICY_RS01540 Thicy_0297 WP_013834856.1: NAD-dependent succinate-semialdehyde dehydrogenase is similar to: | PaperBLAST |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 28% id, 41% cov |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 26% id, 43% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 25% id, 42% cov |
| mnmG THICY_RS08210 Thicy_1619 WP_013836146.1: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 26% id, 31% cov |
| lpdA THICY_RS03615 Thicy_0701 WP_013835252.1: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 54% id, 10% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory