Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiomicrospira cyclica ALM1 (GCF_000214825.1)

Found 21 curated entries in PaperBLAST's database that match '4.2.3.1' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Thiomicrospira cyclica ALM1, or try another query

thrC THICY_RS03715 Thicy_0721 WP_013835272.1: threonine synthase
is similar to:
PaperBLAST

THRC_CORGL / P23669: Threonine synthase; TS; EC 4.2.3.1 from Corynebacterium glutamicum

33% id,
100% cov

Q8YFS0: threonine synthase (EC 4.2.3.1) from Brucella melitensis

35% id,
91% cov

Q2SWH9: threonine synthase (EC 4.2.3.1) from Burkholderia thailandensis

35% id,
91% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory