Curated BLAST
Searching in Desulforamulus ruminis DSM 2154 (GCF_000215085.1)
Found 11 curated entries in PaperBLAST's database that match '2.3.3.21' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Desulforamulus ruminis DSM 2154, or try another query
cimA DESRU_RS01900 Desru_0365 WP_013840437.1: citramalate synthase is similar to: | PaperBLAST |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens cimA / Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens | 55% id, 99% cov |
DVU1914: (R)-citramalate synthase (EC 2.3.3.21) from Desulfovibrio vulgaris | 54% id, 98% cov |
B0K6M2: (R)-citramalate synthase (EC 2.3.3.21) from Thermoanaerobacter sp. | 50% id, 99% cov |
CIMA_SULAC / Q4J6H1: (R)-citramalate synthase; Citramalate synthase; CMS; EC 2.3.3.21 from Sulfolobus acidocaldarius | 45% id, 99% cov |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii cimA / Q58787: (R)-citratemalate synthase subunit (EC 2.3.3.21) from Methanocaldococcus jannaschii Q58787: (R)-citramalate synthase (EC 2.3.3.21) from Methanocaldococcus jannaschii | 32% id, 99% cov |
CIMA_LEPIN / Q8F3Q1: (R)-citramalate synthase CimA; LiCMS; EC 2.3.3.21 from Leptospira interrogans cimA / Q8F3Q1: (R)-citramalate synthase subunit (EC 2.3.3.21) from Leptospira interrogans | 27% id, 69% cov |
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DESRU_RS01880 Desru_0361 WP_013840433.1: 2-isopropylmalate synthase is similar to: | PaperBLAST |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii cimA / Q58787: (R)-citratemalate synthase subunit (EC 2.3.3.21) from Methanocaldococcus jannaschii Q58787: (R)-citramalate synthase (EC 2.3.3.21) from Methanocaldococcus jannaschii | 45% id, 99% cov |
B0K6M2: (R)-citramalate synthase (EC 2.3.3.21) from Thermoanaerobacter sp. | 30% id, 99% cov |
CIMA_LEPIN / Q8F3Q1: (R)-citramalate synthase CimA; LiCMS; EC 2.3.3.21 from Leptospira interrogans cimA / Q8F3Q1: (R)-citramalate synthase subunit (EC 2.3.3.21) from Leptospira interrogans | 29% id, 98% cov |
DVU1914: (R)-citramalate synthase (EC 2.3.3.21) from Desulfovibrio vulgaris | 29% id, 99% cov |
CIMA_SULAC / Q4J6H1: (R)-citramalate synthase; Citramalate synthase; CMS; EC 2.3.3.21 from Sulfolobus acidocaldarius | 30% id, 70% cov |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens cimA / Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens | 32% id, 66% cov |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens cimA / Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens | 23% id, 29% cov |
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DESRU_RS00330 Desru_0061 WP_013840144.1: 2-isopropylmalate synthase is similar to: | PaperBLAST |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii cimA / Q58787: (R)-citratemalate synthase subunit (EC 2.3.3.21) from Methanocaldococcus jannaschii Q58787: (R)-citramalate synthase (EC 2.3.3.21) from Methanocaldococcus jannaschii | 41% id, 99% cov |
B0K6M2: (R)-citramalate synthase (EC 2.3.3.21) from Thermoanaerobacter sp. | 31% id, 99% cov |
CIMA_SULAC / Q4J6H1: (R)-citramalate synthase; Citramalate synthase; CMS; EC 2.3.3.21 from Sulfolobus acidocaldarius | 31% id, 96% cov |
DVU1914: (R)-citramalate synthase (EC 2.3.3.21) from Desulfovibrio vulgaris | 30% id, 97% cov |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens cimA / Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens | 29% id, 97% cov |
CIMA_LEPIN / Q8F3Q1: (R)-citramalate synthase CimA; LiCMS; EC 2.3.3.21 from Leptospira interrogans cimA / Q8F3Q1: (R)-citramalate synthase subunit (EC 2.3.3.21) from Leptospira interrogans | 27% id, 98% cov |
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nifV DESRU_RS06675 Desru_1307 WP_013841352.1: homocitrate synthase is similar to: | PaperBLAST |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii cimA / Q58787: (R)-citratemalate synthase subunit (EC 2.3.3.21) from Methanocaldococcus jannaschii Q58787: (R)-citramalate synthase (EC 2.3.3.21) from Methanocaldococcus jannaschii | 46% id, 75% cov |
CIMA_LEPIN / Q8F3Q1: (R)-citramalate synthase CimA; LiCMS; EC 2.3.3.21 from Leptospira interrogans cimA / Q8F3Q1: (R)-citramalate synthase subunit (EC 2.3.3.21) from Leptospira interrogans | 29% id, 74% cov |
CIMA_SULAC / Q4J6H1: (R)-citramalate synthase; Citramalate synthase; CMS; EC 2.3.3.21 from Sulfolobus acidocaldarius | 31% id, 70% cov |
B0K6M2: (R)-citramalate synthase (EC 2.3.3.21) from Thermoanaerobacter sp. | 30% id, 70% cov |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens cimA / Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens | 31% id, 69% cov |
DVU1914: (R)-citramalate synthase (EC 2.3.3.21) from Desulfovibrio vulgaris | 29% id, 69% cov |
More... |
DESRU_RS17390 Desru_3444 WP_013843393.1: homocitrate synthase is similar to: | PaperBLAST |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii cimA / Q58787: (R)-citratemalate synthase subunit (EC 2.3.3.21) from Methanocaldococcus jannaschii Q58787: (R)-citramalate synthase (EC 2.3.3.21) from Methanocaldococcus jannaschii | 40% id, 55% cov |
CIMA_LEPIN / Q8F3Q1: (R)-citramalate synthase CimA; LiCMS; EC 2.3.3.21 from Leptospira interrogans cimA / Q8F3Q1: (R)-citramalate synthase subunit (EC 2.3.3.21) from Leptospira interrogans | 32% id, 55% cov |
B0K6M2: (R)-citramalate synthase (EC 2.3.3.21) from Thermoanaerobacter sp. | 30% id, 54% cov |
CIMA_SULAC / Q4J6H1: (R)-citramalate synthase; Citramalate synthase; CMS; EC 2.3.3.21 from Sulfolobus acidocaldarius | 31% id, 52% cov |
DVU1914: (R)-citramalate synthase (EC 2.3.3.21) from Desulfovibrio vulgaris | 30% id, 53% cov |
CIMA_GEOSL / Q74C76: (R)-citramalate synthase; Citramalate synthase; EC 2.3.3.21 from Geobacter sulfurreducens cimA / Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens Q74C76: (R)-citramalate synthase (EC 2.3.3.21) from Geobacter sulfurreducens | 27% id, 53% cov |
More... |
accB DESRU_RS15580 Desru_3082 WP_013843045.1: acetyl-CoA carboxylase biotin carboxyl carrier protein is similar to: | PaperBLAST |
CIMA_METJA / Q58787: (R)-citramalate synthase CimA; EC 2.3.3.21 from Methanocaldococcus jannaschii cimA / Q58787: (R)-citratemalate synthase subunit (EC 2.3.3.21) from Methanocaldococcus jannaschii Q58787: (R)-citramalate synthase (EC 2.3.3.21) from Methanocaldococcus jannaschii | 26% id, 61% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory