Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulforamulus ruminis DSM 2154 (GCF_000215085.1)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulforamulus ruminis DSM 2154, or try another query

xylB DESRU_RS15830 Desru_3132 WP_013843092.1: xylulokinase
is similar to:
PaperBLAST

ARAB_BACSU / P94524: Ribulokinase; EC 2.7.1.16 from Bacillus subtilis

24% id,
94% cov

CA265_RS08625: Ribulokinase (EC 2.7.1.16) from Pedobacter sp.

24% id,
95% cov

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

27% id,
60% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory