Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulforamulus ruminis DSM 2154 (GCF_000215085.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Desulforamulus ruminis DSM 2154, or try another query

dapG DESRU_RS09750 Desru_1918 WP_013841940.1: aspartate kinase
is similar to:
PaperBLAST

dapG: aspartate kinase 1; EC 2.7.2.4 from Bacillus subtilis

53% id,
100% cov

dapG / Q04795: aspartokinase I (alpha and beta subunits) (EC 2.7.2.4) from Bacillus subtilis

53% id,
100% cov

AK_MYCTU / P9WPX3: Aspartokinase; Aspartate kinase; ASK; EC 2.7.2.4 from Mycobacterium tuberculosis
P9WPX3: aspartate kinase (EC 2.7.2.4) from Mycobacterium tuberculosis

41% id,
97% cov

More...

DESRU_RS14810 Desru_2926 WP_013842892.1: aspartate kinase
is similar to:
PaperBLAST

AK_PSEPK / Q88EI9: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas putida

53% id,
97% cov

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

53% id,
97% cov

AKLYS_STUS1 / A4VJB4: Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 from Stutzerimonas stutzeri

53% id,
97% cov

More...

DESRU_RS14820 Desru_2928 WP_013842894.1: homoserine dehydrogenase
is similar to:
PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

35% id,
55% cov

lysA DESRU_RS14605 Desru_2885 WP_013842851.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

ABZR86_RS19560: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

38% id,
41% cov

pyrH DESRU_RS09500 Desru_1871 WP_013841896.1: UMP kinase
is similar to:
PaperBLAST

AK_MYCTU / P9WPX3: Aspartokinase; Aspartate kinase; ASK; EC 2.7.2.4 from Mycobacterium tuberculosis
P9WPX3: aspartate kinase (EC 2.7.2.4) from Mycobacterium tuberculosis

25% id,
54% cov

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

25% id,
53% cov

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

24% id,
53% cov

More...

proB DESRU_RS14740 Desru_2912 WP_013842878.1: glutamate 5-kinase
is similar to:
PaperBLAST

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

22% id,
56% cov

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

23% id,
50% cov

AK_PSEPK / Q88EI9: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas putida

22% id,
50% cov

More...

DESRU_RS10980 Desru_2167 WP_013842177.1: type III PLP-dependent enzyme
is similar to:
PaperBLAST

ABZR86_RS19560: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

27% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory