Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulforamulus ruminis DSM 2154 (GCF_000215085.1)

Found 4 curated entries in PaperBLAST's database that match 'O-succinylhomoserine sulfhydrylase' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulforamulus ruminis DSM 2154, or try another query

DESRU_RS09300 Desru_1829 WP_013841856.1: homocysteine synthase
is similar to:
PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

37% id,
100% cov

Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.

33% id,
99% cov

METZ_PSEAE / P55218: O-succinylhomoserine sulfhydrylase; OSH sulfhydrylase; OSHS sulfhydrylase; EC 2.5.1.- from Pseudomonas aeruginosa

40% id,
55% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory