Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulforamulus ruminis DSM 2154 (GCF_000215085.1)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Desulforamulus ruminis DSM 2154, or try another query

ilvB DESRU_RS01875 Desru_0360 WP_013840432.1: biosynthetic-type acetolactate synthase large subunit
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

55% id,
95% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

49% id,
92% cov

ilvB DESRU_RS01860 Desru_0357 WP_013840429.1: biosynthetic-type acetolactate synthase large subunit
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

54% id,
97% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

48% id,
93% cov

xsc DESRU_RS19290 Desru_3834 WP_013843779.1: sulfoacetaldehyde acetyltransferase
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

34% id,
94% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

31% id,
91% cov

xsc DESRU_RS02990 Desru_0590 WP_013840650.1: sulfoacetaldehyde acetyltransferase
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

32% id,
95% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

30% id,
91% cov

DESRU_RS10020 Desru_1972 WP_013841990.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

30% id,
95% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

29% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1988096-1989766 (frame +2) on NC_015589.1 Desulforamulus ruminis DSM 2154, complete sequence
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus
Also see hits to annotated proteins above

29% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory