Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermophagus xiamenensis HS1 (GCF_000220155.1)

Found 73 curated entries in PaperBLAST's database that match '2.1.2.1' as complete word(s).

These curated entries have 53 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Thermophagus xiamenensis HS1, or try another query

glyA GQW_RS0110425 WP_010527895.1: serine hydroxymethyltransferase
is similar to:
PaperBLAST

R9YJZ9: glycine hydroxymethyltransferase (EC 2.1.2.1) from Shewanella algae

58% id,
97% cov

GLYA_THET8 / Q5SI56: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Thermus thermophilus
Q5SI56: glycine hydroxymethyltransferase (EC 2.1.2.1) from Thermus thermophilus

58% id,
97% cov

GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus

58% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory